poolVIM: Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance

Gene-based association tests using the actual impurity reduction (AIR) variable importance. The function aggregates AIR importance measures from a group of SNPs or probes and outputs a p-value for each gene. The procedures builds upon the method described in <doi:10.1093/Bioinformatics/Bty373> and will be published soon.

Version:	1.0.0
Depends:	R (≥ 3.3.1), EmpiricalBrownsMethod (≥ 1.6.0), Hmisc (≥ 4.1)
Imports:	stats, ranger
Published:	2018-07-30
DOI:	10.32614/CRAN.package.poolVIM
Author:	Stefano Nembrini
Maintainer:	Stefano Nembrini <stefanonembrini at gmail.com>
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation:	no
CRAN checks:	poolVIM results

Documentation:

Reference manual:

poolVIM.pdf

Downloads:

Package source:	poolVIM_1.0.0.tar.gz
Windows binaries:	r-devel: poolVIM_1.0.0.zip, r-release: poolVIM_1.0.0.zip, r-oldrel: poolVIM_1.0.0.zip
macOS binaries:	r-release (arm64): poolVIM_1.0.0.tgz, r-oldrel (arm64): poolVIM_1.0.0.tgz, r-release (x86_64): poolVIM_1.0.0.tgz, r-oldrel (x86_64): poolVIM_1.0.0.tgz

Linking:

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