plasma: Partial LeAst Squares for Multiomic Analysis

Contains tools for supervised analyses of incomplete, overlapping multiomics datasets. Applies partial least squares in multiple steps to find models that predict survival outcomes. See Yamaguchi et al. (2023) <doi:10.1101/2023.03.10.532096>.

Version: 1.1.3
Depends: R (≥ 3.5.0)
Imports: methods, stats, graphics, survival, pls, plsRcox, Polychrome (≥ 1.5.0), viridisLite, beanplot, oompaBase
Suggests: R.rsp, tidyr, ClassDiscovery
Published: 2024-04-28
DOI: 10.32614/CRAN.package.plasma
Author: Kevin R. Coombes [cre, aut], Kyoko Yamaguchi [aut], Salma Abdelbaky [aut]
Maintainer: Kevin R. Coombes <krc at>
License: Apache License (== 2.0)
NeedsCompilation: no
Materials: NEWS
CRAN checks: plasma results


Reference manual: plasma.pdf
Vignettes: plasma: Interpretation
plasma: Partial LeAst Squares for Multiomics Analysis


Package source: plasma_1.1.3.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): plasma_1.1.3.tgz, r-oldrel (arm64): plasma_1.1.3.tgz, r-release (x86_64): plasma_1.1.3.tgz, r-oldrel (x86_64): plasma_1.1.3.tgz
Old sources: plasma archive


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