karlen: Real-Time PCR Data Sets by Karlen et al. (2007)

Real-time quantitative polymerase chain reaction (qPCR) data sets by Karlen et al. (2007) <doi:10.1186/1471-2105-8-131>. Provides one single tabular tidy data set in long format, encompassing 32 dilution series, for seven PCR targets and four biological samples. The targeted amplicons are within the murine genes: Cav1, Ccn2, Eln, Fn1, Rpl27, Hspg2, and Serpine1, respectively. Dilution series: scheme 1 (Cav1, Eln, Hspg2, Serpine1): 1-fold, 10-fold, 50-fold, and 100-fold; scheme 2 (Ccn2, Rpl27, Fn1): 1-fold, 10-fold, 50-fold, 100-fold and 1000-fold. For each concentration there are five replicates, except for the 1000-fold concentration, where only two replicates were performed. Each amplification curve is 40 cycles long. Original raw data file is Additional file 2 from "Statistical significance of quantitative PCR" by Y. Karlen, A. McNair, S. Perseguers, C. Mazza, and N. Mermod (2007) <https://static-content.springer.com/esm/art%3A10.1186%2F1471-2105-8-131/MediaObjects/12859_2006_1503_MOESM2_ESM.ZIP>.

Version: 0.0.2
Depends: R (≥ 2.10)
Imports: tibble
Published: 2024-04-30
DOI: 10.32614/CRAN.package.karlen
Author: Ramiro Magno ORCID iD [aut, cre], Pattern Institute [cph, fnd]
Maintainer: Ramiro Magno <rmagno at pattern.institute>
BugReports: https://github.com/ramiromagno/karlen/issues
License: CC BY 4.0
URL: https://rmagno.eu/karlen/, https://github.com/ramiromagno/karlen
NeedsCompilation: no
Materials: README NEWS
CRAN checks: karlen results


Reference manual: karlen.pdf


Package source: karlen_0.0.2.tar.gz
Windows binaries: r-devel: karlen_0.0.2.zip, r-release: karlen_0.0.2.zip, r-oldrel: karlen_0.0.2.zip
macOS binaries: r-release (arm64): karlen_0.0.2.tgz, r-oldrel (arm64): karlen_0.0.2.tgz, r-release (x86_64): karlen_0.0.2.tgz, r-oldrel (x86_64): karlen_0.0.2.tgz


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