SLIDE: Single Cell Linkage by Distance Estimation is SLIDE

This statistical method uses the nearest neighbor algorithm to estimate absolute distances between single cells based on a chosen constellation of surface proteins, with these distances being a measure of the similarity between the two cells being compared. Based on Sen, N., Mukherjee, G., and Arvin, A.M. (2015) <doi:10.1016/j.ymeth.2015.07.008>.

Version: 1.0.0
Depends: R (≥ 3.4.0)
Suggests: knitr, rmarkdown
Published: 2018-06-15
DOI: 10.32614/CRAN.package.SLIDE
Author: Gourab Mukherjee [aut], Arjun Panda [aut, cre], Ann Arvin [aut], Adrish Sen [aut], Nandini Sen [aut]
Maintainer: Arjun Panda <arjunpanda at>
License: GPL-3
NeedsCompilation: no
CRAN checks: SLIDE results


Reference manual: SLIDE.pdf
Vignettes: SLIDE Vignette


Package source: SLIDE_1.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): SLIDE_1.0.0.tgz, r-oldrel (arm64): SLIDE_1.0.0.tgz, r-release (x86_64): SLIDE_1.0.0.tgz, r-oldrel (x86_64): SLIDE_1.0.0.tgz


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