RNOmni: Rank Normal Transformation Omnibus Test

Inverse normal transformation (INT) based genetic association testing. These tests are recommend for continuous traits with non-normally distributed residuals. INT-based tests robustly control the type I error in settings where standard linear regression does not, as when the residual distribution exhibits excess skew or kurtosis. Moreover, INT-based tests outperform standard linear regression in terms of power. These tests may be classified into two types. In direct INT (D-INT), the phenotype is itself transformed. In indirect INT (I-INT), phenotypic residuals are transformed. The omnibus test (O-INT) adaptively combines D-INT and I-INT into a single robust and statistically powerful approach. See McCaw ZR, Lane JM, Saxena R, Redline S, Lin X. "Operating characteristics of the rank-based inverse normal transformation for quantitative trait analysis in genome-wide association studies" <doi:10.1111/biom.13214>.

Depends: R (≥ 3.2.2)
Imports: plyr, Rcpp, stats
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat (≥ 3.0.0), withr, R.rsp
Published: 2023-09-11
DOI: 10.32614/CRAN.package.RNOmni
Author: Zachary McCaw ORCID iD [aut, cre]
Maintainer: Zachary McCaw <zmccaw at alumni.harvard.edu>
License: GPL-3
NeedsCompilation: yes
Materials: NEWS
CRAN checks: RNOmni results


Reference manual: RNOmni.pdf
Vignettes: Rank Normal Omnibus Association Test


Package source: RNOmni_1.0.1.2.tar.gz
Windows binaries: r-devel: RNOmni_1.0.1.2.zip, r-release: RNOmni_1.0.1.2.zip, r-oldrel: RNOmni_1.0.1.2.zip
macOS binaries: r-release (arm64): RNOmni_1.0.1.2.tgz, r-oldrel (arm64): RNOmni_1.0.1.2.tgz, r-release (x86_64): RNOmni_1.0.1.2.tgz, r-oldrel (x86_64): RNOmni_1.0.1.2.tgz
Old sources: RNOmni archive

Reverse dependencies:

Reverse depends: EWCE
Reverse imports: AllelicSeries


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