RNAseqQC: Quality Control for RNA-Seq Data

Functions for semi-automated quality control of bulk RNA-seq data.

Version: 0.2.1
Depends: R (≥ 4.0)
Imports: AnnotationHub, AnnotationFilter, BiocGenerics, ensembldb, circlize, DESeq2, SummarizedExperiment, ComplexHeatmap, matrixStats, grid, ggpointdensity, ggrepel, ggplot2, cowplot, patchwork, purrr, dplyr, stringr, tidyr, tibble, tidyselect, magrittr
Suggests: rmarkdown, knitr, recount3, apeglm, ggrastr, gghighlight
Published: 2024-07-15
DOI: 10.32614/CRAN.package.RNAseqQC
Author: Frederik Ziebell [cre], Frederik Ziebell ORCID iD [aut], GlaxoSmithKline Research & Development Limited [cph] (GlaxoSmithKline Research & Development Limited; registered address: 980 Great West Road, Brentford, Middlesex TW8 9GS, United Kingdom)
Maintainer: Frederik Ziebell <f_ziebell at web.de>
BugReports: https://github.com/frederikziebell/RNAseqQC/issues
License: Apache License (≥ 2)
URL: https://github.com/frederikziebell/RNAseqQC
NeedsCompilation: no
Materials: README NEWS
CRAN checks: RNAseqQC results


Reference manual: RNAseqQC.pdf
Vignettes: Creating The Example Data Set
RNA-seq Quality Control


Package source: RNAseqQC_0.2.1.tar.gz
Windows binaries: r-devel: RNAseqQC_0.2.1.zip, r-release: RNAseqQC_0.2.1.zip, r-oldrel: RNAseqQC_0.2.1.zip
macOS binaries: r-release (arm64): RNAseqQC_0.2.1.tgz, r-oldrel (arm64): RNAseqQC_0.2.1.tgz, r-release (x86_64): RNAseqQC_0.2.1.tgz, r-oldrel (x86_64): RNAseqQC_0.2.1.tgz
Old sources: RNAseqQC archive


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