Last updated on 2024-12-26 03:49:59 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.9.6 | 31.95 | 207.54 | 239.49 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.9.6 | 21.52 | 141.98 | 163.50 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.9.6 | 379.92 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.9.6 | 373.98 | OK | |||
| r-devel-windows-x86_64 | 2.9.6 | 35.00 | 249.00 | 284.00 | NOTE | |
| r-patched-linux-x86_64 | 2.9.6 | 38.48 | 196.19 | 234.67 | OK | |
| r-release-linux-x86_64 | 2.9.6 | 29.60 | 196.71 | 226.31 | OK | |
| r-release-macos-arm64 | 2.9.6 | 97.00 | OK | |||
| r-release-macos-x86_64 | 2.9.6 | 155.00 | WARN | |||
| r-release-windows-x86_64 | 2.9.6 | 35.00 | 239.00 | 274.00 | OK | |
| r-oldrel-macos-arm64 | 2.9.6 | 110.00 | OK | |||
| r-oldrel-macos-x86_64 | 2.9.6 | 215.00 | OK | |||
| r-oldrel-windows-x86_64 | 2.9.6 | 43.00 | 299.00 | 342.00 | OK |
Version: 2.9.6
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
MLG-accessors.Rd: genlight-class
aboot.Rd: genind, genpop, genlight-class
bitwise.dist.Rd: genlight-class, genind-class
bitwise.ia.Rd: genlight-class
bootgen-class.Rd: gen-class
bruvo.boot.Rd: genind, boot.phylo, nancycats, nj, nodelabels, tab
bruvo.dist.Rd: genind
bruvo.msn.Rd: genind, nancycats
bruvomat-methods.Rd: genind-class
clonecorrect.Rd: genind-class
coercion-methods.Rd: genind-class, splitStrata
diss.dist.Rd: genind
diversity_ci.Rd: genind
filter_stats.Rd: genind, genlight
fix_replen.Rd: genind
genclone-class.Rd: genind-class, genlight-class
genclone-method.Rd: genind-class
genetic_distance.Rd: genind-class, dist.genpop
genind2genalex.Rd: genind-class
genotype_curve.Rd: genind-class
ia.Rd: import2genind
info_table.Rd: genind-class
informloci.Rd: genind-class
is.clone.Rd: genind-class, genlight-class
missingno.Rd: genind-class, tab
mlg.Rd: ggplot
mlg.filter.Rd: genind-class
pgen.Rd: strata
plot_poppr_msn.Rd: genind-class, genlight-class
poppr-package.Rd: genind-class, genlight-class
poppr.Rd: tab, strata, last_plot
poppr.amova.Rd: genind-class, genlight-class, strata, quasieuclid,
lingoes, cailliez
poppr.msn.Rd: genind, genlight, nancycats, nj, nodelabels, tab
popsub.Rd: genind-class, genlight-class
psex.Rd: strata
read.genalex.Rd: genind, other, genind-class
recode_polyploids.Rd: genind-class, genpop-class
rraf.Rd: strata
shufflepop.Rd: genind-class
snpclone-coercion-methods.Rd: genlight-class
snpclone-method.Rd: genlight-class
test_replen.Rd: genind
upgma.Rd: as.phylo
win.ia.Rd: genlight-class
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 2.9.6
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘algo.Rnw’ using knitr
Error: processing vignette 'algo.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'algo.tex' failed.
LaTeX errors:
! Undefined control sequence.
l.548 \hlkwd{library}\hldef
{(}\hlsng{"poppr"}\hldef{)}
?
! Emergency stop.
! Emergency stop.
l.548
End of file on the terminal!
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘algo.Rnw’
SUMMARY: processing the following file failed:
‘algo.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64