Last updated on 2025-07-04 05:49:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 12.00 | 206.47 | 218.47 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 11.23 | 199.74 | 210.97 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 392.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 179.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 171.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 226.00 | 246.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.480, system: 0.038, elapsed: 1.912 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.004, system: 0.120, elapsed: 12.298 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.211 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.649, system: 0.185, elapsed: 4.532 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.033, system: 0.381, elapsed: 20.024 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.485, system: 0.031, elapsed: 2.147 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.083, system: 0.089, elapsed: 12.834 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.013, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.756, system: 0.167, elapsed: 6.247 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.228 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.218, system: 0.324, elapsed: 22.567 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.032, elapsed: 2.650 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.038, system: 0.086, elapsed: 16.155 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.280 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.698, system: 0.182, elapsed: 5.572 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.234 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.138, system: 0.224, elapsed: 1.084 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.414, system: 0.566, elapsed: 26.983 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.031, elapsed: 2.955 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.946, system: 0.068, elapsed: 23.102 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.406 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.846, system: 0.186, elapsed: 7.601 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.304 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.260, system: 0.458, elapsed: 15.775 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.565, system: 0.790, elapsed: 51.479 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.430, system: 0.043, elapsed: 1.533 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.233, system: 0.055, elapsed: 8.520 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.013, elapsed: 0.238 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.684, system: 0.203, elapsed: 5.514 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.219 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.207, system: 0.334, elapsed: 16.659 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.037, elapsed: 1.973 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.035, system: 0.108, elapsed: 12.871 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.348 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.555, system: 0.175, elapsed: 5.880 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.021, system: 0.354, elapsed: 22.109 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.614, system: 0.037, elapsed: 2.374 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.991, system: 0.071, elapsed: 18.628 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.494 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.591, system: 0.173, elapsed: 9.801 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.382 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.075, system: 0.254, elapsed: 1.599 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.244, system: 0.575, elapsed: 34.629 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.032, elapsed: 3.581 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.962, system: 0.061, elapsed: 12.371 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.517, system: 0.164, elapsed: 5.746 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.219 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.013, system: 0.440, elapsed: 13.325 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.977, system: 0.742, elapsed: 36.555 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64