Last updated on 2025-10-13 05:49:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.79 | 242.09 | 251.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 170.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 168.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.049, elapsed: 1.855 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.052, system: 0.120, elapsed: 11.672 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.958, system: 0.281, elapsed: 6.725 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.008, elapsed: 0.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.393, system: 0.503, elapsed: 21.657 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.610, system: 0.070, elapsed: 1.905 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.148, system: 0.204, elapsed: 15.704 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.857, system: 0.234, elapsed: 6.196 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.008, elapsed: 0.288 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.500, system: 0.557, elapsed: 25.156 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.716, system: 0.067, elapsed: 2.675 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.231, system: 0.258, elapsed: 12.017 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.221 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.856, system: 0.289, elapsed: 4.778 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.007, elapsed: 0.189 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.146, system: 0.235, elapsed: 0.993 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.929, system: 0.908, elapsed: 21.723 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.067, elapsed: 1.871 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.424, system: 0.353, elapsed: 13.627 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.014, elapsed: 0.238 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.769, system: 0.203, elapsed: 6.964 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.008, elapsed: 0.381 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.381, system: 0.495, elapsed: 18.420 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.167, system: 1.176, elapsed: 42.517 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/108s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.050, elapsed: 2.193 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.836, system: 0.104, elapsed: 11.161 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.016, elapsed: 0.260 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.802, system: 0.276, elapsed: 6.087 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.009, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.069, system: 0.484, elapsed: 20.721 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.662, system: 0.069, elapsed: 2.003 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.055, system: 0.268, elapsed: 13.181 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.264 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.829, system: 0.256, elapsed: 5.159 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.009, elapsed: 0.194 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.437, system: 0.656, elapsed: 21.582 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.651, system: 0.072, elapsed: 1.976 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.133, system: 0.273, elapsed: 12.229 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.015, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.705, system: 0.250, elapsed: 5.175 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.016, elapsed: 0.224 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.070, system: 0.260, elapsed: 1.009 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.539, system: 0.930, elapsed: 21.690 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.609, system: 0.072, elapsed: 1.926 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.011, system: 0.286, elapsed: 10.972 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.016, elapsed: 0.230 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.624, system: 0.204, elapsed: 5.911 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.008, elapsed: 0.299 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.021, system: 0.477, elapsed: 17.455 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.257, system: 1.107, elapsed: 37.702 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64