Last updated on 2025-04-25 06:49:33 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 7.91 | 82.55 | 90.46 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 5.15 | 56.34 | 61.49 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 143.20 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 138.06 | ERROR | |||
| r-devel-windows-x86_64 | 1.0.0 | 11.00 | 91.00 | 102.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 7.86 | 77.29 | 85.15 | OK | |
| r-release-linux-x86_64 | 1.0.0 | 9.26 | 76.54 | 85.80 | OK | |
| r-release-macos-arm64 | 1.0.0 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.0.0 | 166.00 | OK | |||
| r-release-windows-x86_64 | 1.0.0 | 12.00 | 92.00 | 104.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | 39.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.0 | 66.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.0 | 16.00 | 110.00 | 126.00 | OK |
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [8s/9s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(glossa)
Loading required package: bs4Dash
Attaching package: 'bs4Dash'
The following object is masked from 'package:graphics':
box
Loading required package: shiny
Attaching package: 'shiny'
The following objects are masked from 'package:bs4Dash':
actionButton, column, insertTab, navbarMenu, tabsetPanel
> library(terra)
terra 1.8.42
Attaching package: 'terra'
The following objects are masked from 'package:testthat':
compare, describe
> library(sf)
Linking to GEOS 3.13.1, GDAL 3.10.3, PROJ 9.6.0; sf_use_s2() is TRUE
>
> test_check("glossa")
Spherical geometry (s2) switched off
although coordinates are longitude/latitude, st_difference assumes that they
are planar
although coordinates are longitude/latitude, st_difference assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 43 ]
══ Skipped tests (11) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-glossa_analysis.R:5:3', 'test-process_layers.R:5:3',
'test-process_polygon.R:5:3', 'test-read_validate_files.R:5:3',
'test-read_validate_files.R:18:3', 'test-read_validate_files.R:30:3',
'test-read_validate_files.R:42:3', 'test-read_validate_files.R:54:3',
'test-read_validate_files.R:78:3', 'test-read_validate_files.R:104:3',
'test-utils.R:4:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-process_presence_absence.R:31:3'): clean_coordinates removes close points based on decimal_digits ──
Error in `GeoThinneR::thin_points(df, long_col = coords[1], lat_col = coords[2],
group_col = group_col, method = "precision", trials = 1,
all_trials = FALSE, seed = seed, precision = decimal_digits)`: Specified longitude or latitude columns do not exist in the data.
Backtrace:
▆
1. └─glossa::clean_coordinates(toy_data, study_area, decimal_digits = 0) at test-process_presence_absence.R:31:3
2. └─GeoThinneR::thin_points(...)
── Error ('test-process_presence_absence.R:62:3'): clean_coordinates is reproducible with seed ──
Error in `GeoThinneR::thin_points(df, long_col = coords[1], lat_col = coords[2],
group_col = group_col, method = "precision", trials = 1,
all_trials = FALSE, seed = seed, precision = decimal_digits)`: Specified longitude or latitude columns do not exist in the data.
Backtrace:
▆
1. └─glossa::clean_coordinates(...) at test-process_presence_absence.R:62:3
2. └─GeoThinneR::thin_points(...)
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [20s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(glossa)
Loading required package: bs4Dash
Attaching package: 'bs4Dash'
The following object is masked from 'package:graphics':
box
Loading required package: shiny
Attaching package: 'shiny'
The following objects are masked from 'package:bs4Dash':
actionButton, column, insertTab, navbarMenu, tabsetPanel
> library(terra)
terra 1.8.42
Attaching package: 'terra'
The following objects are masked from 'package:testthat':
compare, describe
> library(sf)
Linking to GEOS 3.12.2, GDAL 3.5.3, PROJ 9.3.1; sf_use_s2() is TRUE
>
> test_check("glossa")
Spherical geometry (s2) switched off
although coordinates are longitude/latitude, st_difference assumes that they
are planar
although coordinates are longitude/latitude, st_difference assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 43 ]
══ Skipped tests (11) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-glossa_analysis.R:5:3', 'test-process_layers.R:5:3',
'test-process_polygon.R:5:3', 'test-read_validate_files.R:5:3',
'test-read_validate_files.R:18:3', 'test-read_validate_files.R:30:3',
'test-read_validate_files.R:42:3', 'test-read_validate_files.R:54:3',
'test-read_validate_files.R:78:3', 'test-read_validate_files.R:104:3',
'test-utils.R:4:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-process_presence_absence.R:31:3'): clean_coordinates removes close points based on decimal_digits ──
Error in `GeoThinneR::thin_points(df, long_col = coords[1], lat_col = coords[2],
group_col = group_col, method = "precision", trials = 1,
all_trials = FALSE, seed = seed, precision = decimal_digits)`: Specified longitude or latitude columns do not exist in the data.
Backtrace:
▆
1. └─glossa::clean_coordinates(toy_data, study_area, decimal_digits = 0) at test-process_presence_absence.R:31:3
2. └─GeoThinneR::thin_points(...)
── Error ('test-process_presence_absence.R:62:3'): clean_coordinates is reproducible with seed ──
Error in `GeoThinneR::thin_points(df, long_col = coords[1], lat_col = coords[2],
group_col = group_col, method = "precision", trials = 1,
all_trials = FALSE, seed = seed, precision = decimal_digits)`: Specified longitude or latitude columns do not exist in the data.
Backtrace:
▆
1. └─glossa::clean_coordinates(...) at test-process_presence_absence.R:62:3
2. └─GeoThinneR::thin_points(...)
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [19s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(glossa)
Loading required package: bs4Dash
Attaching package: 'bs4Dash'
The following object is masked from 'package:graphics':
box
Loading required package: shiny
Attaching package: 'shiny'
The following objects are masked from 'package:bs4Dash':
actionButton, column, insertTab, navbarMenu, tabsetPanel
> library(terra)
terra 1.8.42
Attaching package: 'terra'
The following objects are masked from 'package:testthat':
compare, describe
> library(sf)
Linking to GEOS 3.12.2, GDAL 3.8.5, PROJ 9.3.1; sf_use_s2() is TRUE
>
> test_check("glossa")
Spherical geometry (s2) switched off
although coordinates are longitude/latitude, st_difference assumes that they
are planar
although coordinates are longitude/latitude, st_difference assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
although coordinates are longitude/latitude, st_intersects assumes that they
are planar
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 43 ]
══ Skipped tests (11) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-glossa_analysis.R:5:3', 'test-process_layers.R:5:3',
'test-process_polygon.R:5:3', 'test-read_validate_files.R:5:3',
'test-read_validate_files.R:18:3', 'test-read_validate_files.R:30:3',
'test-read_validate_files.R:42:3', 'test-read_validate_files.R:54:3',
'test-read_validate_files.R:78:3', 'test-read_validate_files.R:104:3',
'test-utils.R:4:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-process_presence_absence.R:31:3'): clean_coordinates removes close points based on decimal_digits ──
Error in `GeoThinneR::thin_points(df, long_col = coords[1], lat_col = coords[2],
group_col = group_col, method = "precision", trials = 1,
all_trials = FALSE, seed = seed, precision = decimal_digits)`: Specified longitude or latitude columns do not exist in the data.
Backtrace:
▆
1. └─glossa::clean_coordinates(toy_data, study_area, decimal_digits = 0) at test-process_presence_absence.R:31:3
2. └─GeoThinneR::thin_points(...)
── Error ('test-process_presence_absence.R:62:3'): clean_coordinates is reproducible with seed ──
Error in `GeoThinneR::thin_points(df, long_col = coords[1], lat_col = coords[2],
group_col = group_col, method = "precision", trials = 1,
all_trials = FALSE, seed = seed, precision = decimal_digits)`: Specified longitude or latitude columns do not exist in the data.
Backtrace:
▆
1. └─glossa::clean_coordinates(...) at test-process_presence_absence.R:62:3
2. └─GeoThinneR::thin_points(...)
[ FAIL 2 | WARN 0 | SKIP 11 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc