Last updated on 2025-01-30 04:49:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.3.1 | 52.14 | 645.97 | 698.11 | OK | |
| r-devel-linux-x86_64-debian-gcc | 3.3.1 | 33.15 | 373.14 | 406.29 | OK | |
| r-devel-linux-x86_64-fedora-clang | 3.3.1 | 1240.55 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 3.3.1 | 1133.07 | OK | |||
| r-devel-windows-x86_64 | 3.3.1 | 47.00 | 571.00 | 618.00 | OK | |
| r-patched-linux-x86_64 | 3.3.1 | 57.35 | 597.41 | 654.76 | OK | |
| r-release-linux-x86_64 | 3.3.1 | 49.02 | 594.62 | 643.64 | OK | |
| r-release-macos-arm64 | 3.3.1 | 247.00 | OK | |||
| r-release-macos-x86_64 | 3.3.1 | 313.00 | ERROR | |||
| r-release-windows-x86_64 | 3.3.1 | 49.00 | 556.00 | 605.00 | OK | |
| r-oldrel-macos-arm64 | 3.3.0 | 138.00 | OK | |||
| r-oldrel-macos-x86_64 | 3.3.0 | 278.00 | OK | |||
| r-oldrel-windows-x86_64 | 3.3.1 | 40.00 | 704.00 | 744.00 | OK |
Version: 3.3.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [138s/143s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(Surrogate)
>
> test_check("Surrogate")
Loading required namespace: cubature
Loading required namespace: FNN
Loading required namespace: parallel
[1] "Starting parallel simulations"
[1] "Finishing parallel simulations"
Loading required namespace: copula
Loading required namespace: fitdistrplus
Loading required namespace: stringr
[ FAIL 2 | WARN 0 | SKIP 8 | PASS 109 ]
══ Skipped tests (8) ═══════════════════════════════════════════════════════════
• On CRAN (8): 'test-fit_model_SurvSurv.R:37:13',
'test-fit_model_SurvSurv.R:58:13', 'test-goodness_of_fit_SurvSurv.R:19:13',
'test-goodness_of_fit_copula_models.R:8:3',
'test-goodness_of_fit_copula_models.R:55:3',
'test-goodness_of_fit_copula_models.R:102:3',
'test-sensitivity_analysis_SurvSurv.R:46:3',
'test-sensitivity_intervals.R:195:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-fit_model_ContCont_copula.R:176:3'): fit_copula_ContCont() works ──
Error in `maxOptim(fn = fn, grad = grad, hess = hess, start = start, method = "BFGS",
fixed = fixed, constraints = constraints, finalHessian = finalHessian,
parscale = parscale, control = mControl, ...)`: NA in the initial gradient
Backtrace:
▆
1. └─Surrogate::fit_copula_ContCont(...) at test-fit_model_ContCont_copula.R:176:3
2. └─Surrogate:::fit_copula_submodel_ContCont(...)
3. ├─base::suppressWarnings(...)
4. │ └─base::withCallingHandlers(...)
5. └─maxLik::maxLik(...)
6. └─maxLik (local) maxRoutine(...)
7. └─maxLik:::maxOptim(...)
── Error ('test-fit_model_ContCont_copula.R:376:3'): GoF functions work ────────
Error in `maxOptim(fn = fn, grad = grad, hess = hess, start = start, method = "BFGS",
fixed = fixed, constraints = constraints, finalHessian = finalHessian,
parscale = parscale, control = mControl, ...)`: NA in the initial gradient
Backtrace:
▆
1. └─Surrogate::fit_copula_ContCont(...) at test-fit_model_ContCont_copula.R:376:3
2. └─Surrogate:::fit_copula_submodel_ContCont(...)
3. ├─base::suppressWarnings(...)
4. │ └─base::withCallingHandlers(...)
5. └─maxLik::maxLik(...)
6. └─maxLik (local) maxRoutine(...)
7. └─maxLik:::maxOptim(...)
[ FAIL 2 | WARN 0 | SKIP 8 | PASS 109 ]
Deleting unused snapshots:
• goodness_of_fit_SurvSurv/marginal-survival-functions-gof.svg
• goodness_of_fit_SurvSurv/prob-of-dying-wo-progression-gof.svg
• goodness_of_fit_copula_models/association-gof-0-contcont-schizo.svg
• goodness_of_fit_copula_models/association-gof-0-ordcont-schizo.svg
• goodness_of_fit_copula_models/association-gof-0-ordord-schizo.svg
• goodness_of_fit_copula_models/association-gof-1-contcont-schizo.svg
• goodness_of_fit_copula_models/association-gof-1-ordcont-schizo.svg
• goodness_of_fit_copula_models/association-gof-1-ordord-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-s0-contcont-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-s0-ordcont-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-s0-ordord-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-s1-contcont-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-s1-ordcont-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-s1-ordord-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-t1-contcont-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-t1-ordcont-schizo.svg
• goodness_of_fit_copula_models/marginal-gof-t1-ordord-schizo.svg
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64