Functional Rarity Indices Computation


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Documentation for package ‘funrar’ version 1.4.1

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combination_trait_dist Multiple distance matrices
compute_dist_matrix Functional Distance Matrix
distance_matrix Functional Distance Matrix
distinctiveness Functional Distinctiveness on site-species matrix
distinctiveness_alt Other Functional Distinctiveness within range
distinctiveness_com Functional Distinctiveness for a single community
distinctiveness_dimensions Distinctiveness dimensions
distinctiveness_global Global/Regional Functional Distinctiveness from dissimilarity matrix
distinctiveness_range Functional Distinctiveness within range
distinctiveness_stack Functional Distinctiveness on a stacked data.frame
distinctiveness_tidy Functional Distinctiveness on a stacked data.frame
funrar Functional Rarity Indices
funrar_stack Functional Rarity indices on stacked data.frame
is_relative Tell if matrix or data.frame has relative abundances
make_relative Relative abundance matrix from absolute abundance matrix
matrix_to_stack Matrix to stacked (= tidy) data.frame
matrix_to_tidy Matrix to stacked (= tidy) data.frame
restrictedness Geographical Restrictedness on site-species matrix
restrictedness_stack Geographical Restrictedness for stacked data.frame
restrictedness_tidy Geographical Restrictedness for stacked data.frame
scarcity Scarcity on site-species matrix
scarcity_com Scarcity for a single community
scarcity_stack Scarcity
scarcity_tidy Scarcity
stack_to_matrix Stacked (= tidy) data.frame to matrix
tidy_to_matrix Stacked (= tidy) data.frame to matrix
uniqueness Functional Uniqueness for site-species matrix matrix
uniqueness_dimensions Uniqueness dimensions
uniqueness_stack Functional Uniqueness on stacked data.frame
uniqueness_tidy Functional Uniqueness on stacked data.frame