Fit Probabilistic Index Models

Documentation for package ‘pim’ version 2.0.2

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Probabilistic Index Models

-- A --

add.poset	Add a poset to a pim.environment object
add.poset-method	Add a poset to a pim.environment object
as.data.frame	Convert a pim.environment to a data frame
as.data.frame-method	Convert a pim.environment to a data frame
as.matrix	Convert a pim.summary object to a matrix
as.matrix-method	Convert a pim.summary object to a matrix
as.matrix.pim.summary	Convert a pim.summary object to a matrix

-- C --

classes	Extract information from pim.environment and pim.poset objects
classes-method	Extract information from pim.environment and pim.poset objects
coef	Extract the coefficients from a pim or pim.summary object
coef-method	Extract the coefficients from a pim or pim.summary object
compare	Extract information from pim.environment and pim.poset objects
compare-method	Extract information from pim.environment and pim.poset objects
confint	Calculate Wald confidence intervals around the coefficients of a PIM
confint-method	Calculate Wald confidence intervals around the coefficients of a PIM
confint.pim	Calculate Wald confidence intervals around the coefficients of a PIM
confint.pim.summary	Calculate Wald confidence intervals around the coefficients of a PIM
create.poset	Create a poset
CreateScoreFun	Create a score function for use in a pim.

-- D --

This is the Dysphagia data

-- E --

EngelData	This is the engel data
estimator.BB	Estimator functions for probabilistic index models
estimator.glm	Estimator functions for probabilistic index models
estimator.nleqslv	Estimator functions for probabilistic index models
estimators	Estimator functions for probabilistic index models
Extract.pim.summary	Extract method for pim.summary objects

-- F --

FEVData	This is the Childhood respiratory disease data
fitted	Getters for slots of a pim object
fitted-method	Getters for slots of a pim object
formula	Extract the formula from a pim or pim.formula object
formula-method	Extract the formula from a pim or pim.formula object

-- G --

Getters for slots of a pim object

-- H --

has.intercept	Check whether formula has an explicit intercept
has.intercept-method	Check whether formula has an explicit intercept
has.specials	Extract information from a pim.formula object
has.specials-method	Extract information from a pim.formula object

-- I --

Check whether a pim environment is complete

-- K --

Getters for slots of a pim object

-- L --

L	Specify the left hand and right hand side of an expression used in pims
lhs	Extract information from a pim.formula object
lhs,	Extract information from a pim.formula object
lhs-method	Extract information from a pim.formula object
link	Extract information from pim.environment and pim.poset objects
link-method	Extract information from pim.environment and pim.poset objects

-- M --

MHData	This is the Mental health data
model	Extract information from pim.environment and pim.poset objects
model-method	Extract information from pim.environment and pim.poset objects
model.matrix	Create a model matrix for a probabilistic index model
model.matrix-method	Create a model matrix for a probabilistic index model
model.matrix.pim	Create a model matrix for a probabilistic index model
model.matrix.pim.formula	Create a model matrix for a probabilistic index model

-- N --

names	Extract information from pim.environment and pim.poset objects
names-method	Extract information from pim.environment and pim.poset objects
new.pim	Create an object of class pim
new.pim.env	Constructor for a pim.environment
new.pim.env-method	Constructor for a pim.environment
new.pim.formula	Constructor for pim.formula
new.pim.formula-method	Constructor for pim.formula
new.pim.poset	Create a pim.poset environment
new.pim.poset-method	Create a pim.poset environment
nobs-method	Extract the number of observations

-- P --

P	Probability function
penv	Extract a pim environment from a model or formula
penv-method	Extract a pim environment from a model or formula
pim	Fitting a Probabilistic Index Model
pim-class	Class pim
pim-getters	Getters for slots of a pim object
pim.environment	The pim.environment class
pim.environment-class	The pim.environment class
pim.fit	Fitter function for a probabilistic index model
pim.formula	Class pim.formula
pim.formula-class	Class pim.formula
pim.poset	The pim.poset class
pim.poset-class	The pim.poset class
pim.summary	Class pim.summary
pim.summary-class	Class pim.summary
pimdata	The data contained in the pim package
PO	Probability function
poset	Extract the poset as a matrix or list
poset-method	Extract the poset as a matrix or list
PP	Specify the left hand and right hand side of an expression used in pims
print	Print methods for the different object types
print-method	Print methods for the different object types

-- R --

R	Specify the left hand and right hand side of an expression used in pims
response	Extract response from a pim.formula or a pim object
response-method	Extract response from a pim.formula or a pim object

-- S --

sandwich.estimator	Pseudo-observation variance sandwich estimator
sandwich.vcov	vcov estimators for pim
score.estimator	Pseudo-observation variance sandwich estimator
score.vcov	vcov estimators for pim
SUData	This is the Surgical unit data
summary	The summary function for the pim class
summary-method	The summary function for the pim class
summary.pim	The summary function for the pim class

-- T --

terms	Extract information from a pim.formula object
terms,	Extract information from a pim.formula object
terms-method	Extract information from a pim.formula object

-- U --

U.sandwich	Internal functions for vcov estimation
U.score	Internal functions for vcov estimation

-- V --

vcov	Methods for vcov
vcov-method	Methods for vcov
vcov.estimators	vcov estimators for pim
vcov.internal	Internal functions for vcov estimation

-- misc --

.make.posfun	Create a poset function
[-method	Extract method for pim.summary objects