Prioritize and Delete Erroneous Taxa in a Large Phylogenetic Tree

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Documentation for package ‘Apoderoides’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

autoDeletion	autoDeletion
calc.Score	calc.Score
calcIntScore_C	Internal Apoderoides Functions
calcOutScore_C	Internal Apoderoides Functions
deleteAnomaly	deleteAnomaly
extractOTUbyRankName_C	Internal Apoderoides Functions
findSubTips_C	Internal Apoderoides Functions
findUpperNode	Internal Apoderoides Functions
get.upperRank	get.upperRank
getAllCentroids	getAllCentroids
getAllCentroids_C	Internal Apoderoides Functions
getAllRankNames	Internal Apoderoides Functions
getRankCentroid_C	Internal Apoderoides Functions
getTipNo_C	Internal Apoderoides Functions
is.monophyleticByRank	Internal Apoderoides Functions
testRankList	testRankList
testTree	testTree