Contains procedures to estimate the nine condensed Jacquard genetic identity coefficients (Jacquard, 1974) <doi:10.1007/978-3-642-88415-3> by constrained least squares (Graffelman et al., 2024) <doi:10.1101/2024.03.25.586682> and by the method of moments (Csuros, 2014) <doi:10.1016/j.tpb.2013.11.001>. These procedures require previous estimation of the allele frequencies. Functions are supplied that estimate relationship parameters that derive from the Jacquard coefficients, such as individual inbreeding coefficients and kinship coefficients.
| Version: | 1.0.2 |
| Depends: | R (≥ 3.3.0), Rsolnp |
| Suggests: | knitr, rmarkdown |
| Published: | 2024-09-17 |
| DOI: | 10.32614/CRAN.package.Jacquard |
| Author: | Jan Graffelman [aut, cre] |
| Maintainer: | Jan Graffelman <jan.graffelman at upc.edu> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://www.r-project.org, http://www-eio.upc.edu/~jan/ |
| NeedsCompilation: | no |
| CRAN checks: | Jacquard results |
| Reference manual: | Jacquard.pdf |
| Vignettes: |
The Jacquard package (source, R code) |
| Package source: | Jacquard_1.0.2.tar.gz |
| Windows binaries: | r-devel: Jacquard_1.0.2.zip, r-release: Jacquard_1.0.2.zip, r-oldrel: Jacquard_1.0.2.zip |
| macOS binaries: | r-devel (arm64): Jacquard_1.0.2.tgz, r-release (arm64): Jacquard_1.0.2.tgz, r-oldrel (arm64): Jacquard_1.0.2.tgz, r-devel (x86_64): Jacquard_1.0.2.tgz, r-release (x86_64): Jacquard_1.0.2.tgz, r-oldrel (x86_64): Jacquard_1.0.2.tgz |
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